| Database |
URL |
| |
|
| 1000Genomes |
http://www.internationalgenome.org/ |
| 3DSNP |
http://cbportal.org/3dsnp/ |
| 3Omics |
https://3omics.cmdm.tw/ |
| CatalogSTR |
https://strider.online/ |
| Catalog of enhancers in hESCs |
http://www.medical-epigenomics.org/papers/barakat2018/ |
| ABS |
https://www.crg.eu/en/programme/programmes-groups/bioinformatics-and-genomics |
| AceView |
http://www.ncbi.nlm.nih.gov/IEB/Research/Acembly |
| ActiveDriverDB |
https://github.com/reimandlab/ActiveDriverDB/issues |
| Adsn |
http://adsn.ddnetbio.com/ |
| AFND |
http://www.allelefrequencies.net/ |
| AlloFinder |
http://mdl.shsmu.edu.cn/ALF/ |
| AMAZONIA |
http://amazonia.transcriptome.eu/ |
| AmtDB |
https://amtdb.org/ |
| ANCO-GeneDB |
https://bioinfo.uth.edu/ancogenedb/ |
| Aneurysm DB |
http://www.cuilab.cn/agd |
| AVPpred |
http://crdd.osdd.net/servers/avppred/ |
| BDO |
http://bioportal.bioontology.org/ontologies/BDO |
| BECon |
https://redgar598.shinyapps.io/BECon/ |
| BioGPS |
http://biogps.org/ |
| BrainScope |
https://brainscope.lumc.nl/brainscope |
| CADD |
https://cadd.gs.washington.edu/ |
| CCB |
https://cellcycle.renci.org/ |
| ChIPSummitDB |
http://summit.med.unideb.hu/summitdb/index.php |
| Chorogenome |
https://hicexplorer.usegalaxy.eu/ |
| Cichlids |
http://cichlids.biosci.gatech.edu/ |
| CITGeneDB |
http://citgenedb.yubiolab.org |
| CLIMA |
http://bioinformatics.hsanmartino.it/clima2/ |
| ClinicalTrials |
https://clinicaltrials.gov/ |
| ClinVar |
https://www.ncbi.nlm.nih.gov/clinvar/ |
| ComiR |
http://www.benoslab.pitt.edu/comir/ |
| CRUNCH |
http://crunch.unibas.ch/crunch/ |
| cWords |
http://servers.binf.ku.dk/cwords/ |
| dbDSM |
http://bioinfo.ahu.edu.cn:8080/dbDSM/index.jsp |
| dbEMT |
http://dbemt.bioinfo-minzhao.org/ |
| DBETH |
<www.hpppi.iicb.res.in/btox/ > |
| dbMAE |
https://mae.hms.harvard.edu/ |
| dbNSFP |
https://sites.google.com/site/jpopgen/dbNSFP |
| DisGeNET |
https://www.disgenet.org/ |
| DO |
https://disease-ontology.org/ |
| Doc2Hpo |
https://impact2.dbmi.columbia.edu/doc2hpo/ |
| E-RNAi |
https://www.dkfz.de/signaling/e-rnai3/ |
| EBI |
https://www.ebi.ac.uk/ |
| eDGAR |
http://edgar.biocomp.unibo.it/gene_disease_db/index.html |
| EpiACDev |
https://cotney.research.uchc.edu/data/ |
| EpimiRBase |
https://www.epimirbase.eu/ |
| Eponine |
https://www.sanger.ac.uk/about/who-we-are |
| ExomeServer |
https://evs.gs.washington.edu/EVS/ |
| FirstEF |
http://rulai.cshl.org/tools/FirstEF/ |
| G2Cdb |
http://www.genes2cognition.org |
| GENCODE |
https://www.gencodegenes.org/human/ |
| GenePAtlas |
http://biocc.hrbmu.edu.cn/GPA/ |
| GeneSetBuildr |
http://www.cisreg.ca/gsb/ |
| Gene Wiki |
http://en.wikipedia.org/wiki/Portal:Gene_Wiki |
| GeneCards |
|
| Geneimprint |
http://www.geneimprint.com/site/home |
| GeneLoc |
https://genecards.weizmann.ac.il/geneloc/about_new.shtml |
| GeneMap |
<www.ncbi.nlm.nih.gov/genemap> |
| GUIDES |
http://guides.sanjanalab.org/#/ |
| H-InvDB |
http://www.h-invitational.jp/ |
| HADb |
http://autophagy.lu/index.html |
| Harmonizome |
http://amp.pharm.mssm.edu/Harmonizome/ |
| HERVd |
https://herv.img.cas.cz/ |
| HExpoChem |
http://www.cbs.dtu.dk/services/HExpoChem-1.0/ |
| HGMD |
http://www.hgmd.cf.ac.uk/ac/index.php |
| HGNC |
https://www.genenames.org |
| hLGDB |
http://lysosome.unipg.it/ |
| HMDAD |
http://www.cuilab.cn/hmdad |
| HMMER3 |
https://www.ebi.ac.uk/Tools/hmmer/ |
| HMP |
https://portal.hmpdacc.org/ |
| HOMD |
http://www.homd.org |
| HomzygMapper |
http://www.homozygositymapper.org/ |
| hORFeome Database |
http://horfdb.dfci.harvard.edu/ |
| HPO |
https://hpo.jax.org/app/ |
| HSF |
http://www.umd.be/HSF3/index.html |
| HUMA |
https://huma.rubi.ru.ac.za/ |
| HumCFS |
https://webs.iiitd.edu.in/raghava/humcfs/index.html |
| HydPred |
http://lishuyan.lzu.edu.cn/hydpred/ |
| HyperCLDB |
http://bioinformatics.hsanmartino.it/hypercldb/ |
| IDADE2 |
http://bass.uib.es/~jaume/IDADE2/https/index.html |
| IGSR |
https://www.internationalgenome.org/1000-genomes-project-publications |
| iLoc-Cell |
http://www.jci-bioinfo.cn/iLoc-Hum |
| IMGT |
http://www.imgt.org/ |
| integrated gene catalog |
http://meta.genomics.cn/meta/home |
| IntSplice |
https://www.med.nagoya-u.ac.jp/neurogenetics/IntSplice/ |
| InvFEST |
http://invfestdb.uab.cat/ |
| ITHANET |
https://www.ithanet.eu/db/ithagenes |
| Kaviar |
http://db.systemsbiology.net/kaviar/cgi-pub/Kaviar.pl |
| lncRNAtor |
http://lncrnator.ewha.ac.kr/ |
| MAHMI |
http://mahmi.org/ |
| MARome |
http://196.1.114.46:8080/MARome/index |
| MDWeb |
http://mmb.irbbarcelona.org/MDWeb2/ |
| MEME Suite |
http://meme-suite.org/ |
| Mendel,MD |
https://mendelmd.org/ |
| MetaQuery |
http://metaquery.docpollard.org/ |
| MetaRanker |
http://www.cbs.dtu.dk/services/MetaRanker/ |
| microDoR |
http://reprod.njmu.edu.cn/cgi-bin/microdor/index.py |
| miR2GO |
http://compbio.uthsc.edu/miR2GO/home.php |
| mLASSO-Hum |
http://bioinfo.eie.polyu.edu.hk/mLASSOHumServer/index.html |
| MSEA |
https://www.metaboanalyst.ca/ |
| mTCTScan |
http://mulinlab.org/mtctscan |
| mtDNA-Serve |
https://mtdna-server.uibk.ac.at/index.html |
| Mutalyzer |
https://mutalyzer.nl/ |
| MutPred |
http://mutpred.mutdb.org/ |
| NCBI |
https://www.ncbi.nlm.nih.gov/ |
| NetChop |
http://www.cbs.dtu.dk/services/NetChop/ |
| NetGene2 |
http://www.cbs.dtu.dk/services/NetGene2/ |
| NetNGlyc |
http://www.cbs.dtu.dk/services/NetNGlyc/ |
| Netview |
http://netview.tigem.it/netview_project/netview_tools.html |
| NGD |
http://www.nencki-genomics.org |
| NHGRI Project |
https://research.nhgri.nih.gov/microarray/index.shtml |
| NIF |
https://neuinfo.org/ |
| OKdb |
http://okdb.appliedbioinfo.net/ |
| OMIM |
https://omim.org/ |
| OncoDB.HCC |
http://oncodb.hcc.ibms.sinica.edu.tw/index.htm |
| ONTOAD |
http://bioportal.bioontology.org/ontologies/ONTOAD |
| OpenTargets |
https://www.targetvalidation.org/ |
| OrthoDisease |
http://orthodisease.sbc.su.se/cgi-bin/index.cgi |
| OsteoporosAtlas |
http://biokb.ncpsb.org/osteoporosis/index.php |
| OverGeneDB |
http://overgenedb.amu.edu.pl |
| PanelApp |
https://panelapp.genomicsengland.co.uk/ |
| PaPI |
http://papi.unipv.it/ |
| PathogenFinder |
https://cge.cbs.dtu.dk/services/PathogenFinder/ |
| PDID |
http://biomine.cs.vcu.edu/servers/PDID/index.php |
| PDZPepInt |
http://modpepint.informatik.uni-freiburg.de/PDZPepInt/Input.jsp |
| Pedican |
http://pedican.bioinfo-minzhao.org/ |
| PepPSy |
http://peppsy.genouest.org/query |
| PGP |
https://www.personalgenomes.org/ |
| PharmGKB |
https://www.pharmgkb.org/ |
| PhenoHM |
https://phenome.cchmc.org/phenoBrowser/Phenome |
| Phenolyzer |
http://phenolyzer.wglab.org/ |
| PhenomicDB |
https://en.wikipedia.org/wiki/PhenomicDB |
| Phenomizer |
http://compbio.charite.de/phenomizer/ |
| PhenoScanner |
http://www.phenoscanner.medschl.cam.ac.uk/ |
| PhenoTips |
https://phenotips.com/ |
| Piphillin |
http://piphillin.secondgenome.com/ |
| PolyPhen2 |
http://genetics.bwh.harvard.edu/pph2/ |
| PolySearch2 |
http://polysearch.cs.ualberta.ca/index |
| PredictSNP2 |
http://loschmidt.chemi.muni.cz/predictsnp2/ |
| Progenetix |
https://www.progenetix.org/ |
| ProteomicsDB |
https://www.proteomicsdb.org/proteomicsdb/#overview |
| ProteoRE |
http://www.proteore.org/ |
| PRS |
http://mrcieu.mrsoftware.org/PRS_atlas/ |
| PubGene |
https://www.pubgene.com/ |
| QMEAN |
https://swissmodel.expasy.org/qmean/ |
| QTRG |
https://geneticmedicine.weill.cornell.edu/genome |
| Quokka |
http://quokka.erc.monash.edu/ |
| R spider |
http://www.bioprofiling.de/gene_list.html |
| RAAR |
http://www.lerner.ccf.org/cancerbio/heemers/RAAR/ |
| RasMol |
http://www.bernstein-plus-sons.com/software/rasmol/ |
| RatMine |
https://omictools.com/ratmine-tool |
| REGene |
http://regene.bioinfo-minzhao.org/ |
| RIDDLE |
http://www.functionalnet.org/riddle/ |
| RSSsite |
https://www.itb.cnr.it/rss/ |
| Saqqaqproject |
https://ancientgenome.dk/ |
| ScaPD |
http://bioinfo.wilmer.jhu.edu/ScaPD/ |
| sciAI |
https://sci.ai/ |
| SEGEL |
http://www.chengfeng.info/smoking_database.html |
| Semantic db |
http://sbb.cellfinder.org/ |
| SNP2TFBS |
https://ccg.epfl.ch/snp2tfbs/ |
| SNPDelScore |
https://www.ncbi.nlm.nih.gov/research/snpdelscore/ |
| SNPs GO |
https://snps-and-go.biocomp.unibo.it/snps-and-go/index.html |
| SPEED |
https://speed2.sys-bio.net/ |
| SpindleP |
http://www.cbs.dtu.dk/services/SpindleP/ |
| StemCellNet |
http://stemcellnet.sysbiolab.eu/ |
| StSNP |
http://ilyinlab.org/StSNP/ |
| SubPhosPred |
http://bioinfo.ncu.edu.cn/SubPhosPred.aspx |
| SugarBindDB |
https://sugarbind.expasy.org/ |
| SURFY |
http://wlab.ethz.ch/surfaceome/ |
| T1Dbase |
http://www.t1dbase.org |
| T2D-Db |
http://t2ddb.ibab.ac.in |
| TCGA Portal |
https://www.cancer.gov/ |
| UCSCGenBrowser |
https://genome.ucsc.edu/cgi-bin/hgGateway |
| UK10K |
https://www.uk10k.org/ |
| UMD-Predictor |
http://umd-predictor.eu/index.php |
| UniReD |
http://bioinformatics.med.uoc.gr/unired/ |
| VarSome |
https://varsome.com/ |
| VDJsolver |
http://www.cbs.dtu.dk/services/VDJsolver/ |
| Vega |
http://vega.sanger.ac.uk |
| Vega Browser |
http://vega.archive.ensembl.org/index.html |
| VeryGene |
http://www.verygene.com |
| VHLdb |
http://vhldb.bio.unipd.it/ |
| Zikv-CDB |
http://zikadb.cpqrr.fiocruz.br |